Children's Oncology Group (COG) Cell Culture and Xenograft Repository

Data Archive

TaqMan RT-PCR primers and probes used in the study:

Inhibition of Histone Deacetylase (HDAC) 1, a Drug Target Identified by Expression Profiling, Sensitizes Multi-Drug-Resistant Neuroblastoma Cell Lines to Cytotoxic Agents

by: Nino Keshelava, Elai Davicioni, Zesheng Wan, Lingyun Ji, Richard Sposto, Timothy J. Triche, C. Patrick Reynolds


HDAC1 (BC000301)
forward primer sequence: 5'-CCAAATGCAGGCGATTCCT-3'
reverse primer sequence: 5'-AGAATCGGAGAACTCTTCCT CACA-3'
probe: 5'-TGACAAGCGCATCTCGATCTGCTCCT-3'.

FN1 (NM_002026)
forward primer sequence: 5'- AGATCTACCTGTACACCTTGAATGACA-3'
reverse primer sequence: 5'-CTGCCATGATACCAGCAAGGA-3'
probe: 5'-CATTGATGCACCATCCAA CCTGCGT-3'.

HSPB1 (NM_001540)
forward primer sequence: 5'-AGGATGGC GTGGTGGAGAT-3'
reverse primer sequence: 5'-TGTATTTCCGCGTGAAGCAC-3'
probe: 5'-TGTAGCCATGCTCGTCCTGCCG-3'.